Posters & application notes

Posters & application notes

2019

Poster

Multi-omics approaches for diagnostics
Authors: Becker J, Moucadel V – With BioMérieux
Table ronde, Lyonbiopole, Lyon, France

Poster

Evaluation of integrative clustering  methods for the analysis of multi-omics data
Authors: Chauvel C, Novoloaca A, Veyre P, Reynier F, Becker J
Conference: UseR 2019, Toulouse, France

Poster

BioTracs-MIMOSA: Mass spectrometry processing of Metabolomics Data
Authors: Abi-Ghanem J, Hennig K, Ouattara D;A, Bequet F.
RFMF, Clermont Ferrand, France

Poster

Identification by MALDI-TOF (VITEK® MS) of the highly pathogenic species: Burkholderia mallei and Burkholderia pseudomallei
Authors: Monnin V, Polsinelli S, Jacob D, Arend S, Boisse C, Michel F, Celliere B, Courault P, Villet R, Durand G, GirardV
Conference: ECCMID 2019, Amsterdam, the Netherlands

2018

Poster

Combination of ribosome display and next generation sequencing as a powerful method for identification of affibody binders against β-lactamase CTX-M15
Authors: Lagoutte P, Potisopon S, Elie C, Donnat S, Mignon C, Stadthagen Gomez G, Werle B
Conference: PEGS 2018, Lisbon, Portugal

Poster

GM15, a new gnotobiotic mouse model to explore interactions between microbiome and host physiology in childhood stunting induced by chronic undernutrition
Authors: Darnaud M, Bogeat P, Dugua H, Schwarzer M, Leulier F, Tamellini A
Conference: ICSB 2018, Lyon, France

Poster

Comparison DNA extraction methods for the analysis of the human gut microbiome using 16S and whole-genome sequencing
Authors: Elie C, Perret M, Louis K, Fritah-Lafont A, Laissner P, Vachon C, Rostaing H, Gervasi G, Reynier F, Saliou A – with BioMérieux
Conference: ICCMG, Geneva, Switzerland

Poster

Benchmark of unsupervised cytometry data analysis methods for the comparison of population
Authors: Courbon B, Beitz B, Delgado A, Sapay N
Conference: ICSB, Lyon, France

Poster

Encapsulin nanocages for simoultaneous surface dispaly and cargo loading
Authors: Mignon C, Lagoutte P, Donnat S, Potisopon S, Werle B

Poster

LUMI-Seq™ – Reconstruction of near full-lenght 16S rRNA genes using Illumina short reads
Authors: Elie C, Hirel j, Baum C, Reynier F, Saliou A
Conference: EMBL, Heidelberg, Germany

Poster

An automatic platform for Genome-Scale Metabolic Model reconstruction and Analysis
Authors: Ouattara D.A, Joseph C, Bunescu A, Abi-Ghanem J, Bequet F
Conference, ECCB 2018, Athens, Greece

Application Note

OMICS Hub Unit/Metabolic

“InsightCell – online monitoring of living cells metabolism”
In collaboration with Bruker
Authors: Bunescu A, Codina A, Pennestri M
Conference: Translational Immunometabolism, Basel, Switzerland

Poster

Towards the deciphering of the MoA of an experimental drug against Chagas disease, using multi-omics platform
Authors: Hennig K, Abi Ghanem J, Bunescu A, Meniche X, Biliaut E, Bequet F, Lewis M, Kelly J, Braillard S, Courtemanche G, Chatelain E.

Poster

Childhood stunting model induced by chronic undernutrition in gnotobiotic mice
Authors: Darnaud M, Bogeat P, Dugua H, Schwarzer M, Leulier F, Tamellini A.
Conference: Keystone Symposia Microbiome, Banff, Canada

2017

Poster

Multi-omic Pathway Enrichment Analysis
Authors: Angelin-Bonnet O, Ouattara D. A, Reynier F., Becker J.
Conference: EMBL, Heidelberg, Germany

Poster

Development of an analytical workflow for the characterization of the microbiota metabolome using a combination of NMR and MS, through targeted & untargeted approaches
Authors: Hennig K, Bunescu A, Ouattara D.A, Meniche X, Abi Ghanem J, Biliaut E, Bequet F
Conference: HPLC 2017, Prague, Czech republic

Poster

Combinatorial design for random molecular cloning and screening of high yield expression vectors
Authors: Mariano N, Mignon C, Stadthagen Gomez G, Donnat S, Lagoutte P, Werle B
Conference: Recombinant Protein Production, Dubrovnik, Croatie

Poster

BIOSPECIMENS v1.5: a web platform to facilitate collaborative research on infectious diseases
Authors: Louis K, Rimbault B, Delestre C, Mouscaz Y, Albrieux M, Boisse C, Villet R, Boissy G
Conference: JOBIM, 2017

2016

Poster

Evaluation of integrative approaches for the analysis of multi_omics data
Authors: Novoloaca A, Reynier F, Becker J
JOBIM, 2016

Poster

Protein sequence recoding, codon usage bias on the bench
Authors: Mariano N, Mignon C, Chenavas S, Stadthagen G, Lugari A, Perot C., Donnat S, Lagoutte P, Diot F, Sodoyer R, Werle B
Conference: PEGS Boston

Poster

Met-SAMoA (Metabolic Screening of Antimicrobial Mode of Action) Development of an integrated NMR/MS metabolomics approach for the determination of the novelty of new antimicrobials mechanisms of action based on their metabolic signature
Authors: Bunescu A, Ouattara D.A, Meniche X, Billaut E, Boisse C, Tambosco J and Bequet F
Conference: ECCMID 2016, Amsterdam, NL

Poster

Development of an improved protocol for lipid analysis based on heat inactivation of enzymes
Authors: Meniche X, Ouattara D.A, Hennig K, Sköld K, Boren M, Elias Y, Biliaut E, Bogeat P, Boisse C, Peltier M, Jacob C, Bunescu A, Bequet F
Conference: IPID MAPS Annual Meeting 2016, La Jolla, US

Poster

Prevention of metabolite change due to enzymatic post-sample activity using heat based enzyme inactivation
Authors: Bunescu A, Ouattara D. A, Sköld K, Boren M, Biliaut E, Hennig K ,Bogeat P, Boisse C, Peltier M, Meniche X, Jacob C, Bequet F
Conference: 5th International Conference and Exhibition on Metabolomics, Osaka, Japan

Poster

The bioinformatics timeline of the data integration in BIOASTER
Authors: Mouscaz Y, Cauchard A, Malinovic A, Picandet L, Sapay N, Veyre P and Boissy G
Conference: JeBiF Workshop @ JOBIM 2016 Lyon

Poster

Validation of methods to characterize and monitor injury-induced immune deficiency in severe intensive care unit patients
Authors: Rol M.L, Moucadel V, Cerrato E, Riffaud C, Gallet-Gorius E, Portier A, Demaret J, Tabone O, Malcus C, Rimmele T, Monneret G, Textoris J, Venet F, On behalf of the Realism Study Group
Conference: Congres ESID Barcelona

2015

Poster

BIOSPECIMEN: a web platform developed to facilitate research on infectious diseases & microbiota
Authors: Louis K, Rimbault B, Gaillard C, Costaz L, Guyard C, Khlebnikov A and Troesch A
Conference: CCO XXXIV European Culture Collections as tools in research and biotechnology. Paris

Poster

Comparative Analysis – A Balb/c Mice Core Gut Microbiome?
Authors: Boucinha L, Reynier F, Schwarzer M, Leulier F, van Hijum S
Conference: The Human Microbiome, EMBL conference, Heidelberg, Germany, June 2015

Poster

Insight into the Protein and Expression Systems Engineering unit of Bioaster, a technology institute specialized in infectious diseases and microbiology
Authors: Donnat S, Lagoutte P, Lugari A, Mignon C, Sodoyer R, Stadthagen G and Werle B
Conference: French Brazilian Biomedical Innovation Forum, San Paoulo Instituit Butantan

Poster

Controlled ultrasound cavitation for DNA delivery into bacteria and yeast/ Award for best posterCouronne Laurier
Authors: Stadthagen G, Mignon C, Mestas J-L, Donnat S, Poncet E, Sodoyer R, Lafon C, Werle B
Conference: International Conference of Synthetic Biology, Houston, Sept 2015

Poster

Fast protein liquid chromatography based purification of MS2 bacteriophage virus-like particles
Authors: Lagoutte P, Mignon C, Donnat S, Mast J, Lugari A and Werle B
Conference: Word vaccine congres Europe, Madrid, 9 au 12 novembre 2015

Poster

A new animal facility in Lyon Gerland area to explore microbiome
Authors: Darnaud M, Peltier M, Tamellini A et al
Conference: 8ème Journée Scientifique de la SFR Biosciences, Lyon

Poster

BIOASTER: Animal models and imaging competencies to improve chlamydial studies
Authors: Rekiki A, Darnaud M, Gaudin A , Peltier M, Bogeat P, Tamellini A
Conference: European meeting on animal chlamydiosis

Poster

Multi-omics data integration platform in public-private partnership
Authors: Sapay N, Veyre P, Le Carrour T, Cauchard A, Garnier J
Conference: JOBIM, Clermont-Ferrand

Poster

Evaluation of heat stabilization for the conservation of biological samples as an approach for metabolomics: a 1H-NMR/LC-MS metabolite profiling study
Authors: Bequet F, Bunescu A, Ouattara D.A, Meniche X, Da Costa Jacob C, Billiaut E, Bogeat P, Gaillard C, Peltier M, Sköld K, Boren M, Tamellini A, Guyard C, Troesch A
Conference: Metabolomics Conference 2015 – San

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